Timeline



Sep 1, 2014:

1:19 AM Ticket #812 (include autoconf macros in doxygen docs) created by Peter
An old idea: include autoconf macros as input to doxygen. It might …

Aug 25, 2014:

10:35 AM Changeset [3313] by Peter
Correct syntax so it works in VPATH build. Correct yat-hello source so …
10:29 AM Changeset [3312] by Peter
correct lazycheck deps
10:29 AM Changeset [3311] by Peter
append EXTRA_DIST with some m4 files that were missing in dist (only …
8:52 AM Changeset [3310] by Peter
a first version of new class Pileup. refs #806

Aug 23, 2014:

7:12 AM Ticket #811 (brokeln html link to trivial iterator) closed by Peter
fixed: (In [3309]) fixes #811
7:12 AM Changeset [3309] by Peter
fixes #811
3:00 AM Ticket #811 (brokeln html link to trivial iterator) created by Peter
We have an alias that link to …

Aug 21, 2014:

8:30 AM Changeset [3308] by Peter
fixed two more glitches in the new version of 'make …
6:41 AM Changeset [3307] by Peter
bump version to 0.12.2pre
6:37 AM Changeset [3306] by Peter
merge ptach release 0.12.1 into trunk
6:27 AM Milestone yat 0.12.1 completed
This is a bugfix release. It adds a test in configure to check if …
6:24 AM SubversionCheckout edited by Peter
(diff)
6:23 AM WikiStart edited by Peter
(diff)
6:22 AM Changeset [3305] by Peter
tagging version 0.12.1
6:07 AM Changeset [3304] by Peter
Preparing release 0.12.1
5:55 AM Ticket #810 (Bam::end() doesn't work when cigar contains BAM_CEQUAL and BAM_CDIFF) closed by Peter
fixed: (In [3303]) New macro YAT_FUNC_BAM_CALEND, which checks if function …
5:55 AM Changeset [3303] by Peter
New macro YAT_FUNC_BAM_CALEND, which checks if function bam_calend is …

Aug 20, 2014:

8:55 AM Changeset [3302] by Peter
add test for BamRead::end(). Use samtools' bam_calend if …
7:50 AM Changeset [3301] by Peter
refs #810. minor corrections
7:43 AM Changeset [3300] by Peter
BAM_CBACK is not #defined in older versions of bam.h. refs #810

Aug 19, 2014:

8:41 AM Ticket #810 (Bam::end() doesn't work when cigar contains BAM_CEQUAL and BAM_CDIFF) created by Peter
Bam::end(void) is implemented using bam_calend, but that function …

Aug 18, 2014:

7:30 AM Ticket #809 (use zlib's pc file) created by Peter
zlib installs a pc file (just like gsl); we should use require field …
4:08 AM Changeset [3299] by Peter
fix some glitches in make release-tag-upload rule (found while …

Aug 8, 2014:

9:15 AM Ticket #807 (Yates' correction in Fisher) closed by Peter
fixed: (In [3298]) Yates' correction in Fisher's exact test. fixes #807.
9:15 AM Changeset [3298] by Peter
Yates' correction in Fisher's exact test. fixes #807.
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