Timeline



Oct 14, 2014:

10:03 AM Changeset [3330] by Peter
update copyright years

Oct 12, 2014:

10:25 AM Changeset [3329] by Peter
new class CigarIterator? that can be used to (surprise) iterate over a …

Oct 10, 2014:

1:41 PM Changeset [3328] by Peter
avoid temporary variables; prefer initialization. refs #806
10:30 AM Changeset [3327] by Peter
redefine Pileup::const_iterator so it avoids reads that do not overlap …

Oct 8, 2014:

3:30 AM Changeset [3326] by Peter
use same variable name (p) in docs as in argument list

Oct 7, 2014:

3:44 AM Changeset [3325] by Peter
new functions phred and phred_inv that calculate phred scaled …
12:56 AM Changeset [3324] by Peter
grammar in comment
12:55 AM Changeset [3323] by Peter
prefer strcmp over generic std::equal

Oct 6, 2014:

8:41 AM Changeset [3322] by Peter
change name of test function to more descriptive …

Sep 19, 2014:

9:41 AM Ticket #815 (QuantileNormalizer segfaults if input has more columns than rows) closed by Peter
fixed: fixed in r3321
8:59 AM Changeset [3321] by Peter
fixes bug #815
8:50 AM Ticket #815 (QuantileNormalizer segfaults if input has more columns than rows) created by Peter
8:15 AM Ticket #814 (IGP: avoid calculating distance between every pair) closed by Peter
fixed: (In [3320]) speedup. assume Distance is symmetric. closes #814
8:15 AM Changeset [3320] by Peter
speedup. assume Distance is symmetric. closes #814
8:00 AM Changeset [3319] by Peter
avoid long line
7:57 AM Ticket #813 (add short description of IGP) closed by Peter
fixed: (In [3318]) closes #813
7:57 AM Changeset [3318] by Peter
closes #813
7:41 AM Changeset [3317] by Peter
refs #806 add test for Pileup class
7:38 AM Changeset [3316] by Peter
remove trailing ws
6:27 AM Ticket #814 (IGP: avoid calculating distance between every pair) created by Peter
The calculation calculates the distance from between every pair of …
4:09 AM Ticket #813 (add short description of IGP) created by Peter
The docs for IGP only contains a link to a paper, which is annoying. …
Note: See TracTimeline for information about the timeline view.