Timeline



Oct 23, 2014:

4:33 PM Ticket #806 (bam pileup) closed by Peter
fixed: (In [3335]) closes #806
4:33 PM Changeset [3335] by Peter
closes #806
3:26 PM Changeset [3334] by Peter
Avoid stopping at position one passed a pile, instead fast forward to …
2:26 PM Changeset [3333] by Peter
correct docs. refs #806
1:18 PM Changeset [3332] by Peter
In Pileup store reads in a std::list (rather than std::deque) to allow …

Oct 17, 2014:

1:45 AM Changeset [3331] by Peter
update to autoconf-archive 2014.10.15

Oct 14, 2014:

10:03 AM Changeset [3330] by Peter
update copyright years

Oct 12, 2014:

10:25 AM Changeset [3329] by Peter
new class CigarIterator? that can be used to (surprise) iterate over a …

Oct 10, 2014:

1:41 PM Changeset [3328] by Peter
avoid temporary variables; prefer initialization. refs #806
10:30 AM Changeset [3327] by Peter
redefine Pileup::const_iterator so it avoids reads that do not overlap …

Oct 8, 2014:

3:30 AM Changeset [3326] by Peter
use same variable name (p) in docs as in argument list

Oct 7, 2014:

3:44 AM Changeset [3325] by Peter
new functions phred and phred_inv that calculate phred scaled …
12:56 AM Changeset [3324] by Peter
grammar in comment
12:55 AM Changeset [3323] by Peter
prefer strcmp over generic std::equal

Oct 6, 2014:

8:41 AM Changeset [3322] by Peter
change name of test function to more descriptive …
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