Timeline



Dec 3, 2014:

12:23 PM Ticket #808 (prefer using .private variable (when possible) in yat.pc) closed by Peter
fixed: (In [3366]) prefer private variables in yat.pc. closes #808
12:23 PM Changeset [3366] by Peter
prefer private variables in yat.pc. closes #808

Dec 1, 2014:

12:14 PM Ticket #809 (use zlib's pc file) closed by Peter
fixed: (In [3365]) Use pc from zlib and htslib when linking against those …
12:14 PM Changeset [3365] by Peter
Use pc from zlib and htslib when linking against those packages. …

Nov 25, 2014:

2:17 PM Changeset [3364] by Peter
describe htslib support in NEWS and README. refs #794
11:42 AM Changeset [3363] by Peter
improve docs. refs #794
11:41 AM Changeset [3362] by Peter
avoid temp variable. refs #794

Nov 24, 2014:

7:35 AM Changeset [3361] by Peter
remove superfluous namespace
2:22 AM Changeset [3360] by Peter
update copyright years

Nov 23, 2014:

1:05 PM Changeset [3359] by Peter
fix issues in OutBamFile::write. refs #794
8:02 AM Changeset [3358] by Peter
fix how to read from a hts_itr_t. refs #794
2:54 AM Changeset [3357] by Peter
refs #794. implement open and close functions

Nov 22, 2014:

2:34 PM Changeset [3356] by Peter
refs #794. make test/pileup.cc compile with htslib
2:17 PM Changeset [3355] by Peter
refs #794. implement BamRead::end() and BamRead::sequence() correctly …
12:59 PM Changeset [3354] by Peter
refs #794. fix configure test so it works with htslib.
11:26 AM Changeset [3353] by Peter
refs #794. First version that compiles against htslib. Alibi …
12:16 AM Changeset [3352] by Peter
implement BamHeader? against htslib, except parse region which requires …

Nov 21, 2014:

1:20 PM Changeset [3351] by Peter
make BamRead? compile with htslib. refs #794

Nov 20, 2014:

2:25 PM Changeset [3350] by Peter
Make configure htslib aware. Header detection changed to look for …

Nov 13, 2014:

4:59 AM Changeset [3349] by Peter
avoid having a std::set just to count number of jobs. refs #800
2:12 AM Changeset [3348] by Peter
Replace Scheduler::launch() with a function Scheduler::wait(). Before …

Nov 9, 2014:

7:46 AM Changeset [3347] by Peter
remove protected function Scheduler::Job::submit. refs #800.
Note: See TracTimeline for information about the timeline view.