Timeline



Mar 4, 2016:

9:48 AM Ticket #859 (wrapper class around faidx_t) created by Peter
faidx_t is a struct in htslib (and libbam) Create wrapper class or …
8:52 AM Changeset [3474] by Peter
no need to clean things we no longer create
8:44 AM Changeset [3473] by Peter
put back dirstamp dependency which was accidentally removed in …
6:49 AM Changeset [3472] by Peter
generate sorted bam file directly from unsorted sam file; skip …
4:57 AM Changeset [3471] by Peter
merge r3470 into trunk
3:55 AM Changeset [3470] by Peter
use new (from samtools 1) syntax for samtools sort; the old syntax has …

Feb 29, 2016:

2:55 AM Ticket #857 (RNG from negative hypergeometric distribution) closed by Peter
fixed: (In [3469]) New class for NegativeHyperGeometric?. closes #857. The …
2:55 AM Changeset [3469] by Peter
New class for NegativeHyperGeometric?. closes #857. The implementation …
12:43 AM Ticket #858 (A proxy class between std random distributions and GSL RNG) created by Peter
Boost provides many classes for random number distributions and they …

Feb 22, 2016:

12:21 AM Changeset [3468] by Peter
document that Fisher(bool) constructor (with argument) was introduced …

Feb 12, 2016:

1:02 AM Ticket #857 (RNG from negative hypergeometric distribution) created by Peter
Random number generation from the …

Feb 10, 2016:

9:41 AM Ticket #840 (assignment of VectorMutable does not compile) closed by Peter
fixed: (In [3467]) add VectorMutable? assignment operator to the API (using …
9:41 AM Changeset [3467] by Peter
add VectorMutable? assignment operator to the API (using already …
4:39 AM Ticket #842 (functor to compare pairs wrt to first only (ignore second)) closed by Peter
fixed: (In [3466]) closes #842. Document how to combine compose_f_gx_hy, …
4:39 AM Changeset [3466] by Peter
closes #842. Document how to combine compose_f_gx_hy, PairFirst?, and …
1:30 AM Ticket #856 (random number from hypergeometric distribution) closed by Peter
fixed: (In [3465]) closes #856
1:29 AM Changeset [3465] by Peter
closes #856

Feb 9, 2016:

11:01 AM Ticket #856 (random number from hypergeometric distribution) created by Peter
1:10 AM Changeset [3464] by Peter
implementing idxstats functions against libhts. refs #852

Feb 3, 2016:

8:39 AM Ticket #855 (OutBamFile constructor segfaults if header is a NULL header) closed by Peter
fixed: (In [3463]) fixes #855
8:39 AM Changeset [3463] by Peter
fixes #855
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