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9:26 AM Changeset [3477] by Peter: add functionality to access which RG IDs that are present in a BamHeader?
6:57 AM Changeset [3476] by Peter: remove created fasta file with 'make clean'

9:05 AM Ticket #859 (wrapper class around faidx_t) closed by Peter: fixed: (In [3475]) closes #859 New class handling Fasta files that have an …
9:05 AM Changeset [3475] by Peter: closes #859 New class handling Fasta files that have an index file …
1:21 AM Ticket #860 (omic::DNA is not thread safe) created by Peter: The DNA class contains static variables, which means there is a …

9:48 AM Ticket #859 (wrapper class around faidx_t) created by Peter: faidx_t is a struct in htslib (and libbam) Create wrapper class or …
8:52 AM Changeset [3474] by Peter: no need to clean things we no longer create
8:44 AM Changeset [3473] by Peter: put back dirstamp dependency which was accidentally removed in …
6:49 AM Changeset [3472] by Peter: generate sorted bam file directly from unsorted sam file; skip …
4:57 AM Changeset [3471] by Peter: merge r3470 into trunk
3:55 AM Changeset [3470] by Peter: use new (from samtools 1) syntax for samtools sort; the old syntax has …

2:55 AM Ticket #857 (RNG from negative hypergeometric distribution) closed by Peter: fixed: (In [3469]) New class for NegativeHyperGeometric?. closes #857. The …
2:55 AM Changeset [3469] by Peter: New class for NegativeHyperGeometric?. closes #857. The implementation …
12:43 AM Ticket #858 (A proxy class between std random distributions and GSL RNG) created by Peter: Boost provides many classes for random number distributions and they …

12:21 AM Changeset [3468] by Peter: document that Fisher(bool) constructor (with argument) was introduced …

1:02 AM Ticket #857 (RNG from negative hypergeometric distribution) created by Peter: Random number generation from the …

9:41 AM Ticket #840 (assignment of VectorMutable does not compile) closed by Peter: fixed: (In [3467]) add VectorMutable? assignment operator to the API (using …
9:41 AM Changeset [3467] by Peter: add VectorMutable? assignment operator to the API (using already …
4:39 AM Ticket #842 (functor to compare pairs wrt to first only (ignore second)) closed by Peter: fixed: (In [3466]) closes #842. Document how to combine compose_f_gx_hy, …
4:39 AM Changeset [3466] by Peter: closes #842. Document how to combine compose_f_gx_hy, PairFirst?, and …
1:30 AM Ticket #856 (random number from hypergeometric distribution) closed by Peter: fixed: (In [3465]) closes #856
1:29 AM Changeset [3465] by Peter: closes #856

11:01 AM Ticket #856 (random number from hypergeometric distribution) created by Peter
1:10 AM Changeset [3464] by Peter: implementing idxstats functions against libhts. refs #852

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