Timeline



Jan 16, 2017:

4:59 AM Changeset [3580] by Peter
bumping version to 0.14.1pre
4:54 AM Changeset [3579] by Peter
merge release 0.14 into trunk
4:23 AM Milestone yat 0.14 completed
- The concept 'Distance' now requires that operator() works on …
4:22 AM SubversionCheckout edited by Peter
release 0.14 (diff)
4:21 AM WikiStart edited by Peter
release 0.14 (diff)
4:12 AM Changeset [3578] by Peter
tagging version 0.14
3:47 AM Changeset [3577] by Peter
prepare release 0.14
3:39 AM Ticket #876 (RNG::instance is not thread safe) closed by Peter
fixed: atomic is left for the future (see ticket #877)
3:39 AM Ticket #877 (Use atomic in double checked locking pattern) created by Peter
related to ticket #876 As discussed in …

Jan 13, 2017:

12:15 AM Changeset [3576] by Peter
remove debug include
12:10 AM Changeset [3575] by Peter
update copyright years

Jan 12, 2017:

2:18 PM Changeset [3574] by Jari Häkkinen
Fixed GCC v6.2 compiler issues (yat is now c++14 compliant)
6:16 AM Ticket #861 (detect failures in BamHeader::text(string)) closed by Peter
fixed: (In [3573]) fixes #861; throw if allocation fails
6:16 AM Changeset [3573] by Peter
fixes #861; throw if allocation fails
4:01 AM Ticket #874 (qQuantileNormalizer with unweighted source and weighted destination) closed by Peter
fixed: (In [3572]) fixes #874
4:01 AM Changeset [3572] by Peter
fixes #874

Jan 10, 2017:

6:47 AM Ticket #875 (speed up weighted qQuantileNormalizer::normalizer) closed by Peter
fixed: (In [3571]) closes #875 With new version of sort_index (since yat …
6:47 AM Changeset [3571] by Peter
closes #875 With new version of sort_index (since yat 0.13) allows …

Jan 9, 2017:

4:46 AM Changeset [3570] by Peter
update copyright years
4:43 AM Changeset [3569] by Peter
std::iterator_traits<T>::value_type does not work on OSX when T is an …
3:16 AM Changeset [3568] by Peter
when test is SKIPped because of old samtools, mention it in log

Jan 8, 2017:

11:39 AM Changeset [3567] by Peter
refs #876 Implementing The Double-Checked Locking Pattern but without …
3:18 AM Ticket #876 (RNG::instance is not thread safe) created by Peter
This is actually the same as pointed out in ticket #568, but the …

Jan 5, 2017:

6:32 PM WikiStart edited by Jari Häkkinen
Added link to 0.14 API documentation (diff)

Jan 4, 2017:

2:28 AM Changeset [3566] by Peter
bumping version to 0.15pre
2:26 AM Changeset [3565] by Peter
New stable branch 0.14
2:23 AM Changeset [3564] by Peter
Prepare 0.14-stable branch
2:20 AM Changeset [3563] by Peter
bump VERSION to 0.13.2pre and fix a link in NEWS
2:16 AM Changeset [3562] by Peter
update copyright years
1:55 AM Changeset [3561] by Peter
Merged release 0.13.1 into trunk
1:33 AM Milestone yat 0.13.1 completed
Bugfix release
1:32 AM SubversionCheckout edited by Peter
release 0.13.1 (diff)
1:32 AM WikiStart edited by Peter
release 0.13.1 (diff)
1:29 AM Changeset [3560] by Peter
tagging version 0.13.1
1:12 AM Changeset [3559] by Peter
correct date format
1:08 AM Changeset [3558] by Peter
correct typo
12:54 AM Changeset [3557] by Peter
updating copyright statements
12:46 AM Changeset [3556] by Peter
Preparing release 0.13.1

Jan 3, 2017:

9:04 AM Ticket #803 (use new iterator concepts) closed by Peter
fixed
9:00 AM Changeset [3555] by Peter
fix indentation and avoid long lines
8:56 AM Changeset [3554] by Peter
remove ws
8:56 AM Changeset [3553] by Peter
reactivate concept assert
8:48 AM Changeset [3552] by Peter
remove ws
8:47 AM Changeset [3551] by Peter
improve docs
6:41 AM Changeset [3550] by Peter
Update copyright years. Happy New Year

Jan 1, 2017:

7:43 AM Ticket #843 (Binomial Confidence Interval) closed by Peter
wontfix: This functionality already exists in boost …
6:57 AM Changeset [3549] by Peter
improve docs English
6:55 AM Ticket #871 (Distance base class) closed by Peter
fixed
5:56 AM Ticket #873 (skip lvalue requirement in Distance concept) closed by Peter
fixed: (In [3548]) The concept 'Distance' now requires that operator() works …
5:56 AM Changeset [3548] by Peter
The concept 'Distance' now requires that operator() works on iterator …

Dec 30, 2016:

12:47 PM Changeset [3547] by Peter
refs #803; use boost iterator concepts in qQuantileNormalizer.

Dec 29, 2016:

11:24 AM Ticket #875 (speed up weighted qQuantileNormalizer::normalizer) created by Peter
related to tickets #535 and #536 There is a code block in weighted …
11:07 AM Ticket #874 (qQuantileNormalizer with unweighted source and weighted destination) created by Peter
The qQuantileNormalizer::operator has four cases: 1. unweighted …
2:28 AM Changeset [3546] by Peter
prefer using constructor rather empty construction + std::copy

Dec 23, 2016:

8:53 AM Changeset [3545] by Peter
remove ws
8:42 AM Changeset [3544] by Peter
refs #803. use boost iterator categories in normalizer::Gauss
8:04 AM Changeset [3543] by Peter
refs #803. use boost iterator categories in normalizer::Spearman
8:02 AM Changeset [3542] by Peter
fix sort_index so it works with iterators that are …
5:04 AM Changeset [3541] by Peter
refs #803; use boost iterator concepts in Centralizer and Zscore
4:59 AM Changeset [3540] by Peter
refs #871 and #873
4:55 AM Changeset [3539] by Peter
docs

Dec 22, 2016:

8:21 AM Changeset [3538] by Peter
convenience classes for archetypes of data iterators
6:06 AM Changeset [3537] by Peter
remove trailing ws
6:00 AM Changeset [3536] by Peter
remove a trailing space
6:00 AM Changeset [3535] by Peter
docs: clarify that functions can be private; refs #871
5:36 AM Ticket #873 (skip lvalue requirement in Distance concept) created by Peter
This is a subticket of #803, but put here to highlight the difference. …

Dec 21, 2016:

9:02 AM Ticket #872 (move test class weighted_iterator_archetype to namespace utility.) closed by Peter
fixed: (In [3534]) move test::weighted_iterator_archetype to …
9:02 AM Changeset [3534] by Peter
move test::weighted_iterator_archetype to …

Dec 19, 2016:

1:33 AM Changeset [3533] by Peter
prefer scoped_array, which is more appropriate in this context, and …
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