Timeline



May 31, 2020:

8:44 AM Changeset [3921] by Peter
Remove comment that implementation might be problematic with reference …
8:21 AM Changeset [3920] by Peter
to handle ALT being <ID> string access to VCFHeader is needed and …
8:07 AM Changeset [3919] by Peter
alt=* is not an SNV
7:52 AM Changeset [3918] by Peter
remove FIXME comment
7:26 AM Changeset [3917] by Peter
allow user to define stop condition
5:31 AM Changeset [3916] by Peter
avoid incrementing read if it's being removed on the next line. Get …
5:22 AM Changeset [3915] by Peter
remove FIXME comment; refs #946
5:21 AM Ticket #946 (calculate Kendall::score in nlogn time) created by Peter
There's a FIXME comment in the code that Kendall::score can be …

May 29, 2020:

4:18 PM Changeset [3914] by Peter
prefer do while loop rather than some home brewed version

May 19, 2020:

12:44 AM Changeset [3913] by Peter
prefer new PP macro YAT_HAVE_HTSLIB. Deprecated macro YAT_HAVE_LIBBAM …
12:07 AM Changeset [3912] by Peter
boost random classes beta_distribution, hyperexponential_distribution …

May 17, 2020:

9:46 AM Changeset [3911] by Peter
fix typos

May 13, 2020:

12:16 PM Changeset [3910] by Peter
add missing file
12:13 PM Changeset [3909] by Peter
add missing file from previous changeset
8:58 AM Ticket #881 (expression class for dgemv) closed by Peter
fixed: In 3908: […]
8:58 AM Changeset [3908] by Peter
#closes #881 Lift out expression classes to their own files, so they …

May 9, 2020:

5:14 AM Ticket #945 (require GSL 1.13) closed by Peter
fixed: In 3907: […]
5:14 AM Changeset [3907] by Peter
remove checks for nullptr before calling gsl free function and require …
3:21 AM Ticket #945 (require GSL 1.13) created by Peter
When calling gsl free function we are often checking that pointer is …

May 8, 2020:

12:25 PM Changeset [3906] by Peter
fix bug introduced in r3890; variable is now named have_htslib
7:23 AM Changeset [3905] by Peter
docs: add missing since tag

May 7, 2020:

1:41 PM Ticket #892 (expression class for dgemm) closed by Peter
fixed: In 3904: […]
1:41 PM Changeset [3904] by Peter
Closes #892 Speed up matrix multiplications when they involve a …
1:37 PM Changeset [3903] by Peter
correct docs
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